| Organism (Normalized Taxonomy) | Antimicrobial Agent | CLSI Breakpoint Class | Evaluated Isolates (n) | Resistant (%R) | Intermediate (%I) | Susceptible (%S) | AIMS Statistical Gate & Surveillance Status |
|---|
| Alert ID | Rule Triggered | Organism & Agent | Unit / Location | MIC / Phenotype Signal | Severity | Human-in-the-Loop Disposition | Interactive Action |
|---|
| Suppression ID | Organism & Agent | Raw Unadjusted Rate | Sample Size (n) | AIMS Rule R5 Action | Clinical Governance Rationale |
|---|---|---|---|---|---|
SUP-2025-01 |
Klebsiella pneumoniae — Amikacin | 50.0% R | n = 2 | Auto-Suppressed (n < Threshold) | Prevents false outbreak escalation from 1/2 resistant isolates; routed to cumulative watch list. |
SUP-2025-02 |
Pseudomonas aeruginosa — Ceftazidime | 100.0% R | n = 1 | Auto-Suppressed (n < Threshold) | Single-isolate artifact suppressed from population trend rate; individual AST still reported. |
SUP-2025-03 |
Acinetobacter baumannii — Gentamicin | 66.7% R | n = 3 | Auto-Suppressed (n < Threshold) | Below minimum statistical stability threshold (CLSI M39 alignment). |
SUP-2025-04 |
Escherichia coli — Nitrofurantoin (Inpatient) | 33.3% R | n = 3 | Auto-Suppressed (n < Threshold) | Sub-threshold denominator flagged; suppressed from automated stewardship alert queue. |
SUP-2025-05 |
Enterobacter cloacae — Cefepime | 50.0% R | n = 2 | Auto-Suppressed (n < Threshold) | Small-denominator instability prevented per AIMS Modification M-1. |
SUP-2025-06 |
Staphylococcus aureus — Linezolid | 0.0% R (1 Indeterminate) | n = 2 | Auto-Suppressed (n < Threshold) | Insufficient denominator for trend inference; routed to manual bench verification only. |
Layer 1: Data Standardization & QC
Ingests routine LIS/AST outputs and normalizes organism taxonomy, S/I/R interpretations, numeric MIC values, specimen sources, patient locations, and ISO timestamps while enforcing first-isolate deduplication.
Layer 2: Surveillance & Antibiogram Layer
Computes longitudinal resistance rates by organism, antimicrobial agent, ward/facility, and time window, transforming fragmented patient-level reports into structured surveillance views.
Layer 3: Analytical & Alerting Engine (R1–R5)
Executes rules-based multidimensional pattern recognition (R1–R5) to detect critical carbapenem resistance, temporal spikes, and spatial clusters—with supervised ML training deferred by design until governed clinical datasets are accrued (Modification M-8).
Layer 4: Mandatory Human-in-the-Loop Governance
Enforces professional disposition vocabulary, override audit logging, and multilayer review aligned with FDA GMLP, CLSI M100, CDC ARLN, and CMS CLIA standards.
Core Relational SQL Schema & Surveillance Transformation Specification (Excerpt — Exhibit 29)
-- AIMS Framework Core Relational Schema & R1-R5 Surveillance View (Adaora N. Ofole)
CREATE TABLE aims_isolates_normalized (
isolate_id VARCHAR(64) PRIMARY KEY,
patient_deid_hash VARCHAR(64) NOT NULL,
facility_code VARCHAR(32) NOT NULL,
ward_unit VARCHAR(64) NOT NULL,
specimen_source VARCHAR(64) NOT NULL,
collection_timestamp TIMESTAMP NOT NULL,
organism_ncbi_taxid VARCHAR(32) NOT NULL,
organism_canonical_name VARCHAR(128) NOT NULL,
first_isolate_window_flag BOOLEAN DEFAULT TRUE
);
CREATE TABLE aims_ast_results (
ast_result_id VARCHAR(64) PRIMARY KEY,
isolate_id VARCHAR(64) REFERENCES aims_isolates_normalized(isolate_id),
antimicrobial_code VARCHAR(32) NOT NULL,
antimicrobial_name VARCHAR(64) NOT NULL,
mic_numeric_ug_ml DECIMAL(8,4),
sir_interpretation CHAR(1) CHECK (sir_interpretation IN ('S', 'I', 'R')),
clsi_m100_edition VARCHAR(16) NOT NULL,
molecular_marker_detected VARCHAR(64)
);
CREATE TABLE aims_hitl_dispositions (
alert_id VARCHAR(64) PRIMARY KEY,
rule_code VARCHAR(8) NOT NULL,
isolate_id VARCHAR(64) REFERENCES aims_isolates_normalized(isolate_id),
reviewer_credential VARCHAR(64) NOT NULL, -- e.g., M(ASCP), PharmD
disposition_status VARCHAR(32) NOT NULL, -- CONFIRMED_ESCALATE, WATCHLIST, OVERRIDE_ARTIFACT
clinical_rationale TEXT NOT NULL,
reviewed_timestamp TIMESTAMP NOT NULL
);
| Diagnostic Platform / Instrument Class | Representative U.S. Systems | Data Elements Mapped into AIMS Layer 1 | Integration Pathway |
|---|---|---|---|
| Automated ID / AST Platforms | BD Phoenix™ Automated Microbiology System bioMérieux VITEK® 2 • Beckman Coulter MicroScan |
Organism ID, numeric MIC dilutions, S/I/R breakpoint calls, expert-rule phenotype flags (ESBL, CRE, MRSA) | HL7 v2.5.1 ORU^R01 / Flat-File CSV LIS Export → AIMS Layer 1 Normalization Schema |
| High-Throughput Molecular Diagnostics | Hologic Panther® / Panther Fusion® System Cepheid GeneXpert® • BioFire® FilmArray® |
Target nucleic-acid amplification results, resistance gene markers (blaKPC, blaNDM, blaOXA-48, mecA, vanA/B) | Genotype–Phenotype Concordance Mapping (AIMS Layer 2 & Rule R4 Discordance Check) |
| Hospital LIS & Stewardship Systems | Epic Beaker® • Oracle Health (Cerner) PathNet • Sunquest / Clinisys | Specimen source, collection timestamp, inpatient unit/ward location, deduplication encounter keys | Read-Only Parallel Sandbox Evaluation (Zero Disruption to Primary Clinical Reporting) |
To support the transition of the validated AIMS Framework from its external observational validation (842 clinical isolates, Exhibit 34) into U.S. clinical microbiology and antimicrobial-stewardship environments, MannaSync Solutions Inc. (Dayton, Ohio, U.S.A.) provides U.S. cloud sandbox hosting, interactive verification infrastructure for the AIMS-EVAL-2025-01 dataset, and HL7/CSV ingestion pipeline testing.
Intellectual Property & Governance Notice: All intellectual property, SQL schemas, R1–R5 rule specifications, and scientific authorship of the AIMS Framework remain the sole and exclusive property of Adaora Nkiruka Ofole, M.S., M.B.A., M(ASCP). No patient protected health information (PHI) is stored or transmitted within this public demonstration portal.
| Milestone / Venue | Identifier / Citation | Status & Role | Significance to U.S. AMR Surveillance |
|---|---|---|---|
| ABRCMS 2026 (Organized by American Society for Microbiology) |
Submission No. 26-TAA-1389(Co-authored with Dr. Joseph Panzarella, Yeshiva University) |
Accepted for Presentation | National scientific dissemination of the AIMS Framework to U.S. microbiology researchers and diagnostic stakeholders. |
| FIS International 2026 (Federation of Infection Societies, Glasgow, UK) |
Acceptance No. 347(Registered & Confirmed) |
Accepted Poster Presentation | International peer review by infectious-disease clinicians, clinical microbiologists, and AMR surveillance specialists. |
| ASM / IDSA IMARI 2027 (Interdisciplinary Meeting on AMR & Innovation) |
Proposal No. 87470(Registered Participant) |
Registered for U.S. Collaborative Engagement | Direct engagement with U.S. infectious-disease specialists and diagnostic technology innovators. |
| Prospective Observational Clinical Validation (Southern Delta University, Nigeria) |
Executed Protocol, QI Charter & MOA (842 De-Identified Clinical Isolates) |
Completed (96.8% Concordance, κ = 0.91) | Demonstrated real-world transferability, 95.4% sensitivity, 97.9% specificity, 14 early-warning signals, and -38 min delay reduction. |
| First-Author Peer-Reviewed Critical Review (Arch. Curr. Res. Int., 2026) |
Ofole, A.N. & Ayanru, D. (2026). 26(9):418–439 | Published (First Author) | Examines AI applications, governance, and implementation barriers across pre-analytical, analytical, and post-analytical microbiology workflows. |